Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs397507444
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.100 0.684 19 2005 2020
dbSNP: rs6295
rs6295
HTR1A
0.645 0.200 5 63962738 intron variant C/G snv 0.49
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.050 1.000 5 2010 2020
dbSNP: rs10748842
rs10748842
NRG3
0.807 0.120 10 81889983 intron variant T/C snv 0.13
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.040 1.000 4 2010 2020
dbSNP: rs3746544
rs3746544
SNAP25 ; SNAP25-AS1
0.790 0.120 20 10306436 3 prime UTR variant G/T snv 0.68
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.030 1.000 3 2009 2020
dbSNP: rs3755557
rs3755557
GSK3B ; LOC107986119
0.807 0.280 3 120096110 non coding transcript exon variant T/A snv 0.14
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.030 1.000 3 2011 2020
dbSNP: rs3787283
rs3787283
SNAP25 ; SNAP25-AS1
0.882 0.040 20 10303770 intron variant A/G snv 0.34
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.030 1.000 3 2009 2020
dbSNP: rs7914558
rs7914558
CNNM2
0.851 0.040 10 103016151 intron variant G/A snv 0.40
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.830 1.000 3 2011 2020
dbSNP: rs1059004
rs1059004
OLIG2
0.925 0.040 21 33028155 3 prime UTR variant C/A snv 0.41
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2008 2020
dbSNP: rs25531
rs25531
SLC6A4 ; LOC105371720
0.581 0.520 17 30237328 upstream gene variant T/C snv 0.18
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 0.500 2 2010 2020
dbSNP: rs2975226
rs2975226
SLC6A3
0.925 0.040 5 1445501 upstream gene variant A/T snv 0.50
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.020 1.000 2 2010 2020
dbSNP: rs2066713
rs2066713
SLC6A4
0.807 0.200 17 30224647 intron variant G/A snv 0.34
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 < 0.001 1 2020 2020
dbSNP: rs284854
rs284854
WBP1L
1.000 0.040 10 102814805 3 prime UTR variant T/A;G snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs3756450
rs3756450 		1.000 0.040 5 1448033 upstream gene variant A/G snv 0.23
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs4147157
rs4147157
WBP1L
1.000 0.040 10 102776603 intron variant G/A snv 8.9E-02
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs4251417
rs4251417
SLC6A4
0.827 0.200 17 30224840 intron variant C/T snv 6.8E-02
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 < 0.001 1 2020 2020
dbSNP: rs464049
rs464049
SLC6A3
1.000 0.040 5 1423790 intron variant A/G snv 0.53
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs5177
rs5177
LRP8
0.851 0.120 1 53246063 3 prime UTR variant G/A;C snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs539689
rs539689
HSPA1B
0.925 0.080 6 31829810 synonymous variant C/G snv 0.57 0.52
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs6039769
rs6039769
SNAP25 ; SNAP25-AS1
1.000 0.040 20 10218306 intron variant A/C;G snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs6354
rs6354
SLC6A4
0.732 0.280 17 30222880 5 prime UTR variant G/C;T snv
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 < 0.001 1 2020 2020
dbSNP: rs7224199
rs7224199
SLC6A4
0.827 0.160 17 30196708 3 prime UTR variant G/T snv 0.49
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 < 0.001 1 2020 2020
dbSNP: rs871925
rs871925
MAD1L1
1.000 0.040 7 2008240 intron variant G/A snv 0.56
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.010 1.000 1 2020 2020
dbSNP: rs4680
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.100 0.854 123 1997 2019
dbSNP: rs6265
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.100 0.869 84 2003 2019
dbSNP: rs759834365
rs759834365
BDNF ; BDNF-AS
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05
CUI: C0036341
Disease: Schizophrenia
Schizophrenia 		0.100 0.872 78 2003 2019